v3.4.0 shows "Plugin Config Warning - In config but not installed:
auto_update. Reinstall via the Plugin Store, or remove these entries from
config.json." auto_update is the core weekly-update setting from #581.
Reconciliation treated every top-level dict not in its private
_SYSTEM_CONFIG_KEYS list as a plugin id, and #581 could not know to extend
that list.
- Move core top-level keys into src/core_config_keys.py (CORE_CONFIG_KEYS)
and use it in reconciliation. Tests fail if a config.template.json key or
a key written by the general-settings save is missing from it.
- A secrets-file key only counts as a non-plugin when no installed plugin
has that id. Plugin secrets are namespaced by id, so installed plugins
with secrets were reported as missing from config on every run.
- still_unresolved() drops "not on disk" findings whose id is no longer a
plugin entry in config, so a stored verdict clears without a restart.
- A plugin whose id is a core key is skipped with a warning, and the fix
never writes a plugin stub over or in place of a core setting.
Co-authored-by: Claude Opus 5 <noreply@anthropic.com>
