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docs: fix broken links, phantom script references, and stale CI description
Repairs every broken relative link in active docs (targets renamed or archived long ago: PLUGIN_DEVELOPMENT.md -> PLUGIN_DEVELOPMENT_GUIDE.md, API_REFERENCE.md -> REST_API_REFERENCE.md, PLUGIN_STORE_USER_GUIDE.md -> PLUGIN_STORE_GUIDE.md, plugin_docs/ dir, TROUBLESHOOTING_QUICK_START.md, and MIGRATION_GUIDE's README link that silently resolved to the docs index instead of the project README). Replaces commands invoking scripts that do not exist (scripts/update_stats.py, validate_registry.py, check_updates.py, fix_permissions.sh) with the real tooling, and rewrites HOW_TO_RUN_TESTS.md's CI section, which described a security-audit workflow that was never committed and a pytest workflow 'queued to land' that landed long ago as test.yml. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01SXb4mKcAkVaxkeTb3YnAdr
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@@ -481,13 +481,13 @@ A: Yes, if a plugin needs API keys, it can access them like core managers do.
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A: Most plugins are small (1-5MB). Check individual plugin documentation for specific requirements.
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**Q: Can I create my own plugin?**
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A: Yes! See [PLUGIN_DEVELOPMENT.md](PLUGIN_DEVELOPMENT.md) for instructions.
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A: Yes! See [PLUGIN_DEVELOPMENT_GUIDE.md](PLUGIN_DEVELOPMENT_GUIDE.md) for instructions.
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---
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## Related Documentation
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- [PLUGIN_DEVELOPMENT.md](PLUGIN_DEVELOPMENT.md) - Create your own plugins
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- [PLUGIN_DEVELOPMENT_GUIDE.md](PLUGIN_DEVELOPMENT_GUIDE.md) - Create your own plugins
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- [PLUGIN_API_REFERENCE.md](PLUGIN_API_REFERENCE.md) - Plugin API documentation
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- [PLUGIN_ARCHITECTURE.md](PLUGIN_ARCHITECTURE.md) - Plugin system architecture
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- [PLUGIN_ARCHITECTURE_SPEC.md](PLUGIN_ARCHITECTURE_SPEC.md) - Plugin system architecture (historical)
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- [REST_API_REFERENCE.md](REST_API_REFERENCE.md) - Complete REST API reference
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